I think I'll do one better and do Caps, SBs, and Homeworlds. 
For the TEC: All ships preceded by CNS (For Commandarian Navy Ship)
Marza: Executor, Oblivion, Furious, Judicator
Kol: Indomitable, Imperious, Solomon, Solanis
Akkan: Exile, Exarch, Timothy, Vigilant, Liberator
Dunov: Orion, Resolute, Virgil, Merlin
Sova: Justiciar, Gallant, Steadfast
Starbases:
Wormholes: Observant N (N is a number)
Homeworld Star: Virtuous (Weapons), Defiant/Defiance (Red-Button), Daedalus (Ship Plant), Solomon (Trading Port)
Homeworld: Xyber XVII
HW Starbase: Base Zero (Prevents Capture and Restores AM)
For the Advent:
Radiance: Merciless (one of the defaults, actually), Brilliance, Perception
Progenitor: Purity, Mercy (thanks, ToJ!), Redeemer
Halcyon: Revealer, Serenity, Tranquility
Rapture: Ascension, Divinity, Enlightenment
Revelation: Apocalyptica (sorry, Stuart), Judgementes, Finality
Starbases:
Wormholes: Watcher N (n is a number, by order of WH discovered)
Homeworld Star: The Seer (Culture Spread), The Sentinel (Weapons Batteries), The Judicator (Meteor Storm), The Revenant (Void)
Homeworld: Deliverance
HW Starbase: Unity's Eye (Prevents Capture and Increases Allegiance)
For the Vasari:
Jarrasul: Exodaria, Sleipnir, Leviathan
Kortul: Torturer, Blackfury, Flagellant
Skirantra: Imprisoner, Enslaver, Oppressor
Antorak: Deciever, Disruptor, Defiler
Vulkoras: Conqueror, Brutallus, Dominator
Starbases:
Wormholes: Overlord N (N is a number)
Homeworld Star: Vasarus' Maw (Debris Vortex), Vasarus' Hold (Shields), Vasarus' Gift (Trading and Colony Pods), Vasarus' Fury (Weapons and Phase Stabilizer)
Homeworld: Vasarus Prime
HW Starbase: Vasarus' Will (Prevents Capture and Has Colony Pods)